Mission Run Overview
Mission Run: Root-vacuous chmod tests + TestOrdering isolation
Prove the read-only gitignore tests bite as root, convert the vacuous history-db chmod test to seam injection, delete dead GitignoreManager._atomic_write, and make TestOrdering pass in isolation.
Bundles #5654 and #5186 (WP04 slice of canceled mission friction-remediation-01M43DRV).
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